- 2 -

26 Similarity and distance measures

- A -

Agglomerative clustering

Analysis of Similarity

ANOSIM

asci

Association analysis

assumptions

Authors

- B -

Background

batch

Behaviour

Behavioural response (Mb)
Simulating data

behavioural

behavioural response

Bibliography

birth

Open population
Simulation parameters dialog - population dynamics

bitmap

bitmaps

- C -

Canonical Correspondence Analysis

capture

catchability

Equal Catchability open - tab
Equal catchability closed - tab
Leslie's Test
Equal catchability
Zero-Truncated Poisson Test

CCA

changing values

Chao

chart export

chart format

charts

Circular Statistics

closed

Closed population
MO - tab
Petersen-Schnabel Mt - tab
Mh - tab
Zippin's Mb - tab
Chao Mt - tab
Chao Mth - tab
Constant probability of capture (M0)
Zero-Truncated Poisson Test
Both individual and temporal differences in capture probability (Mth)

closed data

constant

Methods for closed populations
Closed population
Constant probability of capture (M0)

constant probability of capture

Jolly Seber Const. - tab
Constant probability of capture and survival Jolly-Seber

constant survival

copy

csv

- D -

damping

Darroch

Data

Summary for entering data
Full Data - tab
Jolly Summary - tab
Closed Summary - tab
Entering data in a closed summary table
A simple example of data entry
New Data - Closed Type Summary
Full data - size data

data display

Data entry

Entering full individual tagging data
Entering data in a Jolly-Seber summary table
Entering data in a closed summary table
A simple example of data entry
New Data - Closed Type Summary
Full data - sample columns

Data input

Summary for entering data
New Data Type
Entering full individual tagging data

Data types

death

Open population
Simulation parameters dialog - population dynamics

DECORANA

demo

Installation
Summary for entering data

demonstration data sets

Installation
Summary for entering data

Density from Distance

Detrended Correspondence Analysis

discriminant analysis

distance moved

distribution

Divisive cluster analysis

Dynamica

- E -

Ecom

edit

edit graph

Editing data

enhanced metafile

entering data

New Data - Full individual tagging
New Data - Jolly Type Summary

environmental

equal

Equal Catchability open - tab
Equal catchability closed - tab
Leslie's Test
Equal catchability
Zero-Truncated Poisson Test

example

excel

export graph

- F -

frequency

Full

full data

full individual data

Fuzzy Grouping

- G -

graph

graph export

graph options

graphics

graphs

Plot Estimates - tab
Graph display options
Exporting charts

- H -

Hedgerow Assistant

heterogeneity

Individual variation in capture probability (Mh)
Both individual and temporal differences in capture probability (Mth)

html

- I -

image format

immigration

Individual tag data

individual tagging

individual variation

Initial screen

Install

Installation

Installing

interaction

introduction

Introduction

- J -

Jolly

Jolly Summary - tab
Recaptures - tab
Jolly Seber Results - tab
Jolly Seber Const. - tab
Full Jolly-Seber
Constant probability of capture and survival Jolly-Seber
J-S summary table - Delta T
J-S summary table - Number captured

Jolly-Seber

jpeg

- K -

K means

- L -

Length

Leslie

Lincoln

Methods for closed populations
Temporal change in capture probability (Mt)

- M -

M0

Main form

Mb

Memory

metafile

methods

Methods

An introduction to mark-recapture methods
Methods for closed populations
Full Jolly-Seber

Mh

migration

mixed population

Modelling

Monitor

movement

MR

Mt

Mth

Multiple Regression

- N -

NMDS

Non-metric Multidimensional Scaling

Number captured

number of traps

- O -

Open

Open population
Recaptures - tab
Leslie's Test

Opening data

Other programs

output

Jolly Seber Results - tab
Jolly Seber Const. - tab
MO - tab
Petersen-Schnabel Mt - tab
Mh - tab
Zippin's Mb - tab
Chao Mt - tab
Chao Mth - tab

- P -

parameters

PCA

Petersen

Methods for closed populations
Temporal change in capture probability (Mt)

Pitfalls

plot

Poisson

Equal catchability closed - tab
Zero-Truncated Poisson Test

Principal Components Analysis

print

printing

printing grids

printing output

- R -

Ram

random

RDA

recaptures

Reciprocal Averaging

Redundancy Analysis

References

Removal Sampling

Requirements

Results

Jolly Seber Results - tab
Jolly Seber Const. - tab
MO - tab
Petersen-Schnabel Mt - tab
Mh - tab
Zippin's Mb - tab
Chao Mt - tab
Chao Mth - tab
Equal Catchability open - tab
Equal catchability closed - tab

- S -

sample data sets

Installation
Summary for entering data

sample id

Sample number

save

save as

saving data

saving grids

saving output

SDR

Seber

Jolly Summary - tab
Recaptures - tab
Jolly Seber Results - tab
Jolly Seber Const. - tab
Constant probability of capture and survival Jolly-Seber
J-S summary table - Delta T
J-S summary table - Number captured

send

Sex

Similarity Percentages

SIMPER

Simply Growth

Simply Probit

Simply Tagging

Simulate

Simulation

Simulating data
Setting simulation parameters
Simulation parameters dialog - general
Simulation parameters dialog - behavioural
Simulation parameters dialog - population dynamics

simulation paramethers

Simulator

Size

Subsetting by age, sex or size
Full data - size data

software

Species Diversity & Richness

Species Filtering

step size

Stepwise Regression (SR)

subsetting

summary

Entering data in a closed summary table
New Data - Jolly Type Summary
New Data - Closed Type Summary

summary data

survival

System

- T -

tagging

TeeReader

temporal

Chao temporal change in capture probabilities (Mt)
Both individual and temporal differences in capture probability (Mth)

Schnabel

tests

Equal Catchability open - tab
Equal catchability closed - tab
Leslie's Test
Equal catchability
Zero-Truncated Poisson Test

text

Time

Time steps

trap avoidence

trap happy

trap size

traps

TWINSPAN

Two-way INdicator Species Analysis

- W -

Weight

- Z -

Z

Zippin